In Silico Screening of Soursop Leaf (Annona muricata L.) Secondary Metabolites as Potential Estrogen Receptor Alpha Inhibitors
Abstrak
Kata Kunci
Teks Lengkap:
PDF (English)Referensi
Health Topics: Cancer. Available online: https://www.who.int/health-topics/cancer#tab=tab_1 (accessed on 2024).
Bray, F.; Laversanne, M.; Sung, H.; Ferlay, J.; Siegel, R.L.; Soerjomataram, I.; et al. Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA: A Cancer Journal for Clinicians. 2024, 74, 229–263.
Global Cancer Burden Growing, Amidst Mounting Need for Services. Available online: https://www.who.int/news/item/01-02-2024-global-cancer-burden-growing--amidst-mounting-need-for-services (accessed on 2024).
Ferlay, J.; Ervik, M.; Lam, F.; Colombet, M.; Mery, L.; Piñeros, M.; et al. Global Cancer Observatory: Cancer Today; International Agency for Research on Cancer: Lyon, France, 2020.
Silihe, K.K.; Mbou, W.D.; Ngo Pambe, J.C.; Kenmogne, L.V.; Maptouom, L.F.; Kemegne Sipping, M.T.; et al. Comparative anticancer effects of Annona muricata Linn (Annonaceae) leaves and fruits on DMBA-induced breast cancer in female rats. BMC Complementary Medicine and Therapies. 2023, 23, 234.
Haines, C.N.; Wardell, S.E.; McDonnell, D.P. Current and emerging estrogen receptor-targeted therapies for the treatment of breast cancer. Essays in Biochemistry. 2021, 65, 985–1001.
Rej, R.K.; Thomas, J.E., II; Acharyya, R.K.; Rae, J.M.; Wang, S. Targeting the estrogen receptor for the treatment of breast cancer: Recent advances and challenges. Journal of Medicinal Chemistry. 2023, 66, 8339–8381.
Kumar, A.; Gautam, B.; Dubey, C.; Tripathi, P.K. A review: Role of doxorubicin in treatment of cancer. International Journal of Pharmaceutical Sciences and Research. 2014, 5, 4105.
Jayaraj, R.; Nayagam, S.G.; Kar, A.; Sathyakumar, S.; Mohammed, H.; Smiti, M.; et al. Clinical theragnostic relationship between drug-resistance specific miRNA expressions, chemotherapeutic resistance, and sensitivity in breast cancer: A systematic review and meta-analysis. Cells. 2019, 8.
Nurgali, K.; Jagoe, R.T.; Abalo, R. Editorial: Adverse effects of cancer chemotherapy: Anything new to improve tolerance and reduce sequelae? Frontiers in Pharmacology. 2018, 9, 245.
Mbaveng, A.T.; Kuete, V.; Efferth, T. Potential of Central, Eastern and Western Africa medicinal plants for cancer therapy: Spotlight on resistant cells and molecular targets. Frontiers in Pharmacology. 2017, 8, 343.
Zubaidi, S.N.; Nani, H.M.; Kamal, M.S.A.; Qayyum, T.A.; Maarof, S.; Afzan, A.; et al. Annona muricata: Comprehensive review on the ethnomedicinal, phytochemistry, and pharmacological aspects focusing on antidiabetic properties. Life. 2023, 13, 353.
Moghadamtousi, S.Z.; Fadaeinasab, M.; Nikzad, S.; Mohan, G.; Ali, H.M.; Kadir, H.A. Annona muricata (Annonaceae): A review of its traditional uses, isolated acetogenins and biological activities. International Journal of Molecular Sciences. 2015, 16, 15625–15658.
Najmuddin, S.U.F.S.; Romli, M.F.; Hamid, M.; Alitheen, N.B.; Rahman, N.M.A.N.A. Anti-cancer effect of Annona muricata Linn leaves crude extract (AMCE) on breast cancer cell line. BMC Complementary and Alternative Medicine. 2016, 16, 311.
Pinto, N.C.C.; Campos, L.M.; Evangelista, A.C.S.; Lemos, A.S.; Silva, T.P.; Melo, R.C.; et al. Antimicrobial Annona muricata L. (soursop) extract targets the cell membranes of Gram-positive and Gram-negative bacteria. Industrial Crops and Products. 2017, 107, 332–340.
Balderrama-Carmona, A.P.; Silva-Beltrán, N.P.; Gálvez-Ruiz, J.C.; Ruíz-Cruz, S.; Chaidez-Quiroz, C.; Morán-Palacio, E.F. Antiviral, antioxidant, and antihemolytic effect of Annona muricata L. leaves extracts. Plants. 2020, 9.
Bento, E.B.; Júnior, F.E.B.; de Oliveira, D.R.; Fernandes, C.N.; de Araújo Delmondes, G.; Cesário, F.; et al. Antiulcerogenic activity of the hydroalcoholic extract of leaves of Annona muricata Linnaeus in mice. Saudi Journal of Biological Sciences. 2018, 25, 609–621.
Agu, K.C.; Eluehike, N.; Ofeimun, R.O.; Abile, D.; Ideho, G.; Ogedengbe, M.O.; et al. Possible anti-diabetic potentials of Annona muricata (soursop): Inhibition of α-amylase and α-glucosidase activities. Clinical Phytoscience. 2019, 5, 1–13.
Sokpe, A.; Mensah, M.L.K.; Koffuor, G.A.; Thomford, K.P.; Arthur, R.; Jibira, Y.; et al. Hypotensive and antihypertensive properties and safety for use of Annona muricata and Persea americana and their combination products. Evidence-Based Complementary and Alternative Medicine. 2020, 2020, 8833828.
Moghadamtousi, S.Z.; Rouhollahi, E.; Hajrezaie, M.; Karimian, H.; Abdulla, M.A.; Kadir, H.A. Annona muricata leaves accelerate wound healing in rats via involvement of Hsp70 and antioxidant defence. International Journal of Surgery. 2015, 18, 110–117.
Coria-Téllez, A.V.; Montalvo-Gónzalez, E.; Yahia, E.M.; Obledo-Vázquez, E.N. Annona muricata: A comprehensive review on its traditional medicinal uses, phytochemicals, pharmacological activities, mechanisms of action and toxicity. Arabian Journal of Chemistry. 2018, 11, 662–691.
Kohonou, A.C.N.; Dah-Nouvlessounon, D.; Nounagnon, M.; Sognigbe, B.; Sina, H.; N'Tcha, C.; et al. Antioxidant, anti-inflammatory efficacy and HPLC analysis of Annona muricata leaves extracts from Republic of Benin. American Journal of Plant Sciences. 2020, 11, 803–818.
Sivanandham, V. Determination of phytocomponents in methanolic extract of Annona muricata leaf using GC-MS technique. International Journal of Pharmacognosy and Phytochemical Research. 2015, 7, 1251–1255.
Gleeson, M.P. ADMET for Medicinal Chemists: A Practical Guide; Wiley-VCH: Weinheim, Germany, 2019.
Sheridan, D. Review on computational toxicology methods applied to drug candidates. Annual Review of Pharmacology and Toxicology. 2025, 65, 123–142.
Smith, L.J.; Jones, R.T. Interpreting in silico ADMET predictions in drug development: Challenges and considerations. Journal of Computational Toxicology. 2023, 6, 78–92.
Çorbacıoğlu, Ş.K.; Aksel, G. Receiver operating characteristic curve analysis in diagnostic accuracy studies: A guide to interpreting the area under the curve value. Turkish Journal of Emergency Medicine. 2023, 23, 195–198.
Opo, F.A.D.M.; Alkarim, S.; Alrefaei, G.I.; Molla, M.H.R.; Alsubhi, N.H.; Alzahrani, F.; Ahammad, F. Pharmacophore-model-based virtual-screening approaches identified novel natural molecular candidates for treating human neuroblastoma. Current Issues in Molecular Biology. 2022, 44, 4838–4858.
Neves, B.J.; Braga, R.C.; Melo-Filho, C.C.; Moreira-Filho, J.T.; Muratov, E.N.; Andrade, C.H. QSAR-based virtual screening: Advances and applications in drug discovery. Frontiers in Pharmacology. 2018, 9, 1275.
Najem, S.M.; Kadeem, S.M. A survey on fraud detection techniques in e-commerce. Tech-Knowledge. 2021, 1, 33–47.
Sujon, K.M.; Hassan, R.; Choi, K.; Samad, M.A. Accuracy, precision, recall, F1-score, or MCC? Empirical evidence from advanced statistics, ML, and XAI for evaluating business predictive models. Journal of Big Data. 2025, 12, 268.
Zeynali, T.M.; Nowkarizi, M. Three approaches to measuring recall on the Web: A systematic review. The Electronic Library. 2020, 38, 477–492.
Powers, D.M.W. Evaluation: From precision, recall and F-measure to ROC, informedness, markedness and correlation. arXiv. 2020.
Saito, T.; Rehmsmeier, M. The precision-recall plot is more informative than the ROC plot when evaluating binary classifiers on imbalanced datasets. PLOS ONE. 2015, 10, e0118432.
Chowdhury, R.; Saima, S.A.; Amin, M.A.; et al. In silico discovery of novel cephalosporin antibiotic conformers via ligand-based pharmacophore modelling and de novo molecular design. Journal of Genetic Engineering and Biotechnology. 2025, 23, 100514.
Tran, X.T.; Phan, T.L.; To, V.T.; Tran, N.V.; Nguyen, N.N.; Nguyen, D.N.; Tran, N.T.; Truong, T.N. Integration of the Butina algorithm and ensemble learning strategies for the advancement of a pharmacophore ligand-based model: An in silico investigation of apelin agonists. Frontiers in Chemistry. 2024, 12, 1382319.
Ichsani, L.N.; Elvian, E.; Zahra, C.A.; Ramdani, A.R.S.; Aprilio, K.; Rusdin, A.; Mardisanutomo, H.T.; Muchtaridi, M. Studi in silico daun kemangi (Ocimum basilicum Folium) sebagai antikanker payudara terhadap ESRα. Indonesian Journal of Pharmaceutical Science and Technology. 2025, 12, 319–328.
Lee, S.; Barron, M.G. Structure-based understanding of binding affinity and mode of estrogen receptor α agonists and antagonists. PLoS ONE. 2017, 12, e0169607.
Li, J.; Liu, W.; Song, Y.; Xia, J. Improved method of structure-based virtual screening based on ensemble learning. RSC Advances. 2020, 10, 7609–7618.
Wójcikowski, M.; Ballester, P.J.; Siedlecki, P. Performance of machine-learning scoring functions in structure-based virtual screening. Scientific Reports. 2017, 7, 1–10.
Lipinski, C.A.; Lombardo, F.; Dominy, B.W.; Feeney, P.J. Experimental and computational approaches to estimate solubility and permeability in drug discovery and development settings. Advanced Drug Delivery Reviews. 1997, 23, 3–25.
Benet, L.Z.; Hosey, C.M.; Ursu, O.; Oprea, T.I. BDDCS, the rule of 5 and drugability. Advanced Drug Delivery Reviews. 2016, 101, 89–98.
Sreelakshmi, V.; Raj, N.; Abraham, A. Evaluation of the drug-like properties of kaempferol, chrysophanol and emodin and their interactions with EGFR tyrosine kinase—an in silico approach. Natural Product Communications. 2017, 12.
Understanding Lipinski's Rule of 5 and the Role of LogP Value in Drug Design and Development. Available online: https://www.sailife.com/understanding-lipinskis-rule-of-5-and-the-role-of-logp-value-in-drug-design-and-development/ (accessed on 15 July 2024).
Guan, L.; Yang, H.; Cai, Y.; Sun, L.; Di, P.; Li, W.; et al. ADMET-score—A comprehensive scoring function for evaluation of chemical drug-likeness. MedChemComm. 2019, 10, 148–157.
Wang, N.N.; Huang, C.; Dong, J.; Yao, Z.J.; Zhu, M.F.; Deng, Z.K.; et al. Predicting human intestinal absorption with modified random forest approach: A comprehensive evaluation of molecular representation, unbalanced data, and applicability domain issues. RSC Advances. 2017, 7, 19007–19018.
Suherman, M.; Meilia, E.; Riska, P.; Purnamasari, A.R. In silico study: Secondary metabolites from jambolan (Syzygium cumini L.) as potential breast cancer treatments. Jurnal Ilmiah Farmako Bahari. 2024, 15, 148–162.
Belpaire, F.M.; Bogaert, M.G. The fate of xenobiotics in living organisms. In The Practice of Medicinal Chemistry, 2nd ed.; Wermuth, C.G., Ed.; Academic Press: London, UK, 2003; pp. 501–515.
Afzal, M.; Kazmi, I.; Kaur, R.; Hosawi, S.B.I.; Kaleem, M.; Alzarea, S.I.; et al. Introduction to molecular pharmacology: Basic concepts. In How Synthetic Drugs Work; Kazmi, I.; Karmakar, S.; Shaharyar, M.A.; Afzal, M.; Al-Abbasi, F.A., Eds.; Academic Press: London, UK, 2023; pp. 1–25.
Okella, H.; Okello, E.; Mtewa, A.G.; Ikiriza, H.; Kaggwa, B.; Aber, J.; et al. ADMET profiling and molecular docking of potential antimicrobial peptides previously isolated from African catfish, Clarias gariepinus. Frontiers in Molecular Biosciences. 2022, 9.
Seidel, T.; Bryant, S.D.; Ibis, G.; Poli, G.; Langer, T. 3D pharmacophore modeling techniques in computer-aided molecular design using LigandScout. In Tutorials in Chemoinformatics; Springer: New York, NY, USA, 2017; pp. 279–309.
Susanti, N.M.P.; Laksmiani, N.P.L.; Dewi, P.P.P.; Dewi, P.Y.C. Molecular docking terpinen-4-ol pada protein IKK sebagai antiinflamasi pada aterosklerosis secara in silico. Jurnal Farmasi Udayana. 2019, 8, 44–49.
Giordano, D.; Biancaniello, C.; Argenio, M.A.; Facchiano, A. Drug design by pharmacophore and virtual screening approach. Molecules. 2022, 27, 646.
Chandrasekaran, B.; Agrawal, N.; Kaushik, S. Pharmacophore development. In Encyclopedia of Bioinformatics and Computational Biology; Elsevier: Oxford, UK, 2019; Vol. 2, pp. 677–687.
Suvannang, N.; Preeyanon, L.; Malik, A.A.; Schaduangrat, W.; Worachartcheewan, T.; et al. Probing the origin of estrogen receptor alpha inhibition via large-scale QSAR study. Journal of Molecular Graphics and Modelling. 2018, 82, 201–211.
DOI: https://doi.org/10.24198/ijpst.v12i3.70710
Refbacks
- Saat ini tidak ada refbacks.
| Switch to English Back to Top |
| View My Stats Penerbit Universitas Padjadjaran
Jurnal ini terindeks di :Creative Commons Attribution :
Based on a work at http://jurnal.unpad.ac.id/ijpst/ |
Indonesian Journal of Pharmaceutical Science and Technology




